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Delicious High Protein Yogurt Cookie Dough Cups You’ll Love

Published: Oct 16, 2025 by Julie Chen · This post may contain affiliate links · Leave a Comment

During a recent late-night snack attack, I found myself wishing for something sweet yet guilt-free. That’s when I whipped up these High Protein Yogurt Cookie Dough Cups. They’re the perfect solution for anyone craving a delicious treat that won't derail those healthy eating goals. Packed with creamy, dairy-free yogurt and rich peanut butter, these no-bake goodies are not just quick to prepare, but they’re also freezer-friendly! Whether you need a post-workout snack or a satisfying dessert, these little cups deliver on taste and nutrition without any compromise. Plus, with endless flavor variations, they can adapt to whatever you’re in the mood for. Ready to indulge without the guilt? Let’s dive into this delightful recipe!

Why are these cookie dough cups so special?

Delicious Flavor: Rich peanut butter blends beautifully with creamy yogurt, creating a guilty pleasure without the guilt.
High Protein Boost: Each cup delivers 12g of protein to fuel your day—perfect for post-workout recovery or a midday pick-me-up!
No-Bake Convenience: Quick to prepare, you can whip these up in minutes and freeze them for future cravings.
Versatile Options: Easily customize flavors by swapping in different nut butters or protein powders for a unique twist every time. Want to explore more? Check out our substitution ideas for even more flavor combinations!
Crowd-Pleasing Treat: These little cups are sure to impress friends and family, making them a hit for gatherings or movie nights!

High Protein Yogurt Cookie Dough Cups Ingredients

For the Yogurt Layer
• Dairy-Free Yogurt – Provides creaminess and forms the yogurt layer; use creamy coconut yogurt for optimal texture.
• Peanut Butter – Adds richness to the yogurt layer; almond or sunflower seed butter can be used for a different flavor or nut-free option.
• Vanilla Protein Powder – Enhances the protein content and adds sweetness to the yogurt layer.
• Vanilla Extract – Elevates the overall flavor and aroma of the yogurt layer.
• Unsweetened Chocolate Chips – Adds chocolate flavor to the yogurt layer; dark chocolate chips give a bolder taste.

For the Cookie Dough Layer
• Oat Flour – Serves as the base for the cookie dough layer, providing structure; substitute with almond flour for gluten-free.
• Dairy-Free Milk – Adjusts the consistency of the cookie dough; almond or coconut milk works well.
• Maple Syrup – Provides natural sweetness; agave or date syrup may also be used.
• Additional Chocolate Chips – For extra chocolate flavor and texture in the cookie dough.

Feel free to mix and match these ingredients to create your own spin on these high protein yogurt cookie dough cups!

Step‑by‑Step Instructions for High Protein Yogurt Cookie Dough Cups

Step 1: Prepare the Yogurt Mixture
In a mixing bowl, combine your dairy-free yogurt, peanut butter, vanilla protein powder, and vanilla extract. Use a spatula to blend these ingredients until the mixture is smooth and creamy, about 1-2 minutes. You want it to be thick yet spreadable. Make sure to fold in the unsweetened chocolate chips evenly before moving on to the next step.

Step 2: Make the Cookie Dough
In a separate bowl, mix the oat flour, additional protein powder, vanilla extract, dairy-free milk, and maple syrup. Stir the ingredients together until they form a thick, pliable cookie dough—this should take about 2-3 minutes. If the dough feels too runny, add a tablespoon of oat flour to achieve the right consistency. Once ready, fold in the additional chocolate chips for an extra treat!

Step 3: Layering the Mixtures
Grab your silicone muffin cups and begin layering the yogurt mix into each cup. Spoon a generous layer of the yogurt mixture, pressing it down gently to ensure it adheres. Follow this with a layer of the cookie dough, using your fingers to press down lightly. Repeat the process until the cups are filled, leaving a little space at the top for expansion as they freeze.

Step 4: Freeze the Cups
Once all the cups are filled, place them in the freezer. Allow the High Protein Yogurt Cookie Dough Cups to set for about 2-3 hours or until they are completely solid. This freezing time ensures that the layers meld beautifully, creating a deliciously creamy and fudgy texture that is perfect for snacking.

Step 5: Serve and Enjoy
After freezing, remove the cups from the freezer and let them sit at room temperature for about 5 minutes. This short time allows the High Protein Yogurt Cookie Dough Cups to soften slightly for an even creamier bite. Once ready, enjoy them as a delightful treat or post-workout snack, savoring all the flavors and textures!

What to Serve with High Protein Yogurt Cookie Dough Cups?

Pair these delicious, creamy treats with a variety of delightful options to create a wholesome and satisfying meal experience.

  • Fresh Fruit Salad: A vibrant mix of seasonal fruits adds a refreshing zing, balancing the creaminess and richness of the cups. Enjoy the crunch and natural sweetness of fruits for a perfect contrast!

  • Green Smoothie: Blend spinach, banana, and almond milk for a nutrient-packed drink that complements the flavors of the cookie dough cups. This smoothie brings a touch of freshness and vibrancy to your snack time.

  • Herbal Tea: A soothing warm beverage, like chamomile or peppermint, enhances your dessert experience with its aromatic qualities. Sipping on herbal tea as you enjoy these cups creates a cozy, calming atmosphere.

  • Nutty Granola: Serve these yogurt cups alongside a handful of crunchy granola for added texture and delightful flavors. The nuttiness pairs beautifully, providing an extra layer of satisfaction.

  • Chia Seed Pudding: Rich in nutrients and a lovely creamy texture, chia seed pudding makes a wonderful pairing. It’s a refreshing and nutritious addition, complementing the indulgent chocolate notes in your cups.

  • Dark Chocolate Drizzle: Elevate the dessert by drizzling some melted dark chocolate on top for an extra burst of rich flavor. This not only adds a touch of elegance but also harmonizes with the chocolatey goodness of the cups.

  • Sparkling Water: For a light and refreshing drink, serve these cups with sparkling water infused with lemon or berries. The carbonation and zest elevate the entire experience, making snack time feel like a special event!

How to Store and Freeze High Protein Yogurt Cookie Dough Cups

Fridge: Store any leftover cups in an airtight container in the fridge for up to 3 days. Enjoy chilled for a quick snack or dessert.

Freezer: For longer storage, these high protein yogurt cookie dough cups can be frozen for up to 2 months. Ensure they are well-wrapped to prevent freezer burn.

Thawing: When ready to enjoy, simply remove a cup from the freezer and let it sit at room temperature for about 5 minutes before serving. This will enhance their creaminess.

Reheating: There’s no need to reheat these cups, as they’re best enjoyed chilled. However, feel free to pop them in the microwave for a few seconds if you prefer a softer texture!

High Protein Yogurt Cookie Dough Cups Variations

Feel free to let your creativity shine as you customize these delightful cups to suit your taste and dietary preferences!

  • Nut-Free: Replace peanut butter with sunflower seed butter for a safe, nut-free alternative.
    Using sunflower seed butter gives these cups a delightful twist while ensuring they remain accessible for all munchers.

  • Chocolate Lovers: Substitute vanilla protein powder with chocolate-flavored protein for extra cocoa goodness.
    Chocolate in every layer? Yes, please! It adds an unbelievable richness that chocolate lovers will adore.

  • Dairy-Free & Creamy: Use cashew yogurt instead of coconut or almond yogurt for a super creamy texture.
    Cashew yogurt creates a luxurious, velvety layer that pairs perfectly with the cookie dough, making each bite irresistible.

  • Sweetness Swap: Swap maple syrup for honey or coconut nectar if you’re not strictly vegan.
    This minor adjustment gives a distinct sweetness that enhances the flavor profiles of the cups beautifully.

  • Fruit Infusion: Add a layer of mashed banana or natural fruit puree in between the yogurt and cookie layers.
    A fruity addition tantalizes the palate with bursts of flavor, transforming each bite into a fruity dessert adventure!

  • Nutty Crunch: Fold in chopped nuts or seeds into the cookie dough mixture for delightful texture.
    Adding toasted almonds or pumpkin seeds introduces a crunchy contrast, making your High Protein Yogurt Cookie Dough Cups a textural delight!

  • Protein Twist: Experiment with different protein powders such as plant-based vanilla for varying nutritional benefits.
    This simple swap not only changes the flavor but can also help align with personal health goals, making these treats even more versatile!

  • Spice It Up: Sprinkle in some cinnamon or nutmeg for a warm, inviting flavor twist.
    The addition of spices enhances the overall taste profile, giving your cups a cozy, comforting feel—perfect for any season!

Embrace the possibilities and enjoy crafting your own unique versions. Whether you’re after a sweet treat or a protein-packed snack, these cups can adapt to your cravings!

Expert Tips for High Protein Yogurt Cookie Dough Cups

• Quality Counts: Choose high-quality dairy-free yogurt for the creamiest texture; full-fat versions lend an indulgent feel to each cup.

• Right Consistency: Ensure your cookie dough is thick enough to hold together; if it’s too runny, simply add a tablespoon of oat flour to thicken it.

• Perfect Layering: Press down each layer gently to create structure; this will prevent the cups from collapsing when frozen.

• Store Properly: Use an airtight container for freezing the cups to avoid freezer burn, keeping them fresh for indulgent snacking whenever you like.

• Creative Variants: Don’t hesitate to swap in proteins or nut butters to customize flavors; the High Protein Yogurt Cookie Dough Cups are versatile for any palate!

Make Ahead Options

These High Protein Yogurt Cookie Dough Cups are a wonderful option for meal prep enthusiasts! You can prepare the yogurt mixture and cookie dough separately up to 24 hours in advance; simply refrigerate them in airtight containers. To maintain their creamy texture and prevent freezer burn, layer them in silicone cups and freeze for up to 2 months. When you're ready to enjoy, just pop them out of the freezer and let them sit at room temperature for about 5 minutes to soften slightly. This method ensures you have delicious, guilt-free treats on hand, perfect for those busy weeknights or post-workout cravings!

High Protein Yogurt Cookie Dough Cups Recipe FAQs

How can I choose the best dairy-free yogurt for this recipe?
Absolutely! When selecting dairy-free yogurt, go for high-quality brands that are full-fat for a rich and creamy texture. Look for options that are free from added sugars or artificial ingredients to keep it wholesome. Coconut yogurt tends to offer that creaminess that complements the recipe beautifully, but you can also explore almond or cashew yogurt.

How should I store my High Protein Yogurt Cookie Dough Cups?
For the best results, store any leftover cups in an airtight container in the fridge for up to 3 days. If you want to keep them fresher longer, freeze them for up to 2 months. Just make sure they're well-wrapped to avoid freezer burn, and you're good to go!

Can I freeze these cookie dough cups?
Yes! To freeze, place the cups in an airtight container or wrap them individually in plastic wrap, ensuring they are sealed properly. They can be frozen for up to 2 months. When you want to enjoy one, simply take it out and let it thaw at room temperature for about 5 minutes for the best texture.

What if my cookie dough is too runny?
Very good question! If your cookie dough turns out too runny, don't fret. Just add an extra tablespoon of oat flour to thicken it up. Mix well until you achieve a thick, pliable consistency. This will help the dough hold together in layers when you're assembling your cups.

Are there any dietary considerations for allergies?
Definitely! If you're preparing these High Protein Yogurt Cookie Dough Cups for someone with nut allergies, swap out the peanut butter for sunflower seed butter. Also, make sure to choose nut-free dairy-free yogurt and chocolate chips. Always check ingredient labels for potential allergens to ensure a safe treat for everyone!

What are some creative variations I can try?
The more the merrier! Feel free to mix and match your flavors. Instead of peanut butter, try almond or cashew butter. You can also switch up the protein powder flavor with chocolate or vanilla, or go wild and add in some chopped nuts, seeds, or dried fruits to the cookie dough layer. The possibilities are endless!

High Protein Yogurt Cookie Dough Cups

Delicious High Protein Yogurt Cookie Dough Cups

These High Protein Yogurt Cookie Dough Cups are a delicious and guilt-free treat packed with protein to satisfy your sweet cravings.
Print Recipe Pin Recipe
Prep Time 10 minutes mins
Freezing Time 2 hours hrs
Total Time 2 hours hrs 10 minutes mins
Servings: 8 cups
Course: Dessert
Cuisine: Healthy
Calories: 180
Ingredients Equipment Method Nutrition Notes

Ingredients
  

For the Yogurt Layer
  • 1 cup Dairy-Free Yogurt Use creamy coconut yogurt for optimal texture.
  • ½ cup Peanut Butter Almond or sunflower seed butter can be used.
  • 1 scoop Vanilla Protein Powder
  • 1 teaspoon Vanilla Extract
  • ¼ cup Unsweetened Chocolate Chips Dark chocolate chips for bolder taste.
For the Cookie Dough Layer
  • 1 cup Oat Flour Substitute with almond flour for gluten-free.
  • ¼ cup Dairy-Free Milk Almond or coconut milk works well.
  • 2 tablespoon Maple Syrup Agave or date syrup may also be used.
  • ¼ cup Additional Chocolate Chips For extra flavor and texture.

Equipment

  • mixing bowls
  • Silicone Muffin Cups
  • spatula

Method
 

Step-by-Step Instructions
  1. In a mixing bowl, combine dairy-free yogurt, peanut butter, vanilla protein powder, and vanilla extract. Blend until smooth and creamy, about 1-2 minutes. Fold in unsweetened chocolate chips.
  2. In a separate bowl, mix oat flour, additional protein powder, vanilla extract, dairy-free milk, and maple syrup until a thick cookie dough forms, about 2-3 minutes. Add oat flour if too runny and fold in additional chocolate chips.
  3. Layer the yogurt mixture into silicone muffin cups, pressing down gently. Follow with a layer of cookie dough, pressing down lightly. Repeat until cups are filled, leaving space at the top.
  4. Place the filled cups in the freezer for about 2-3 hours or until solid.
  5. Remove from freezer and let sit at room temperature for about 5 minutes before serving. Enjoy as a treat or post-workout snack.

Nutrition

Serving: 1cupCalories: 180kcalCarbohydrates: 22gProtein: 12gFat: 8gSaturated Fat: 2gPolyunsaturated Fat: 1gMonounsaturated Fat: 5gSodium: 80mgPotassium: 250mgFiber: 3gSugar: 7gCalcium: 5mgIron: 3mg

Notes

These High Protein Yogurt Cookie Dough Cups can be customized with different nut butters or protein powders. Store leftovers in an airtight container.

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Welcome, Fellow Food Adventurer!

Hi, I'm Julie! I'm a passionate home cook who believes every meal should be an adventure. Join me as I share tested recipes, kitchen stories, and culinary discoveries that will inspire your next delicious creation.

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